plantTFdb_annotation




choosefile*  example



Function:

PlantTFDB is a comprehensive database including 320,370 transcript factors from 165 species and classified into 58 families. Comprehensive annotations are made for each identified TF, including functional domains, 3D structures, gene ontology (GO), plant ontology (PO), expression information, expert-curated functional description, binding motifs, regulation information, interaction, references, and cross-linsk to various databases such as UniProt, RefSeq, STRING and Entrez Gene.

Input

Upload protein sequences in FASTA format.

Output:

① annotation table

② annotation statistic pie chart

③ TF family statistic table and histogram

example


Output:


① annotation table



② annotation statistic pie chart

We count up the annotated sequences number and show the result with a pie chart.


③ TF family statistic table and histogram

The first column is TF families. The second is the number of genes that this TF family contains. The third culomn is the gene IDs.


histogram of TF family (only show the top 10 families):